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|---|---|---|---|
| 1 | #include "yakimov_i_multiplication_of_sparse_matrices_crs_storage_format/mpi/include/ops_mpi.hpp" | ||
| 2 | |||
| 3 | #include <mpi.h> | ||
| 4 | |||
| 5 | #include <algorithm> | ||
| 6 | #include <array> | ||
| 7 | #include <cstddef> | ||
| 8 | #include <cstring> | ||
| 9 | #include <fstream> | ||
| 10 | #include <iostream> | ||
| 11 | #include <string> | ||
| 12 | #include <vector> | ||
| 13 | |||
| 14 | #include "util/include/util.hpp" | ||
| 15 | #include "yakimov_i_multiplication_of_sparse_matrices_crs_storage_format/common/include/common.hpp" | ||
| 16 | |||
| 17 | namespace yakimov_i_multiplication_of_sparse_matrices_crs_storage_format { | ||
| 18 | |||
| 19 | namespace { | ||
| 20 | |||
| 21 | 24 | bool ReadDimensions(std::ifstream &file, MatrixCRS &matrix) { | |
| 22 | bool success = true; | ||
| 23 | 24 | file >> matrix.rows; | |
| 24 | 24 | file >> matrix.cols; | |
| 25 | |||
| 26 |
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24 | if (matrix.rows <= 0 || matrix.cols <= 0) { |
| 27 | success = false; | ||
| 28 | } | ||
| 29 | |||
| 30 | 24 | return success; | |
| 31 | } | ||
| 32 | |||
| 33 | 290 | bool ReadRowData(std::ifstream &file, MatrixCRS &matrix, int row_index) { | |
| 34 | 290 | int nonzeros = 0; | |
| 35 | 290 | file >> nonzeros; | |
| 36 | |||
| 37 |
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964 | for (int j = 0; j < nonzeros; ++j) { |
| 38 | 674 | int col_idx = 0; | |
| 39 | 674 | file >> col_idx; | |
| 40 |
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674 | matrix.col_indices.push_back(col_idx); |
| 41 | } | ||
| 42 | |||
| 43 |
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964 | for (int j = 0; j < nonzeros; ++j) { |
| 44 | 674 | double value = 0.0; | |
| 45 | file >> value; | ||
| 46 |
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674 | matrix.values.push_back(value); |
| 47 | } | ||
| 48 | |||
| 49 | 290 | matrix.row_pointers[static_cast<size_t>(row_index) + 1] = | |
| 50 | 290 | matrix.row_pointers[static_cast<size_t>(row_index)] + nonzeros; | |
| 51 | |||
| 52 | 290 | return true; | |
| 53 | } | ||
| 54 | |||
| 55 | 24 | bool ReadMatrixFromFileImpl(const std::string &filename, MatrixCRS &matrix) { | |
| 56 | 24 | std::ifstream file(filename); | |
| 57 | |||
| 58 |
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24 | bool success = ReadDimensions(file, matrix); |
| 59 | |||
| 60 |
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24 | matrix.row_pointers.resize(static_cast<size_t>(matrix.rows) + 1); |
| 61 | 24 | matrix.row_pointers[0] = 0; | |
| 62 | |||
| 63 |
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314 | for (int i = 0; i < matrix.rows; ++i) { |
| 64 |
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290 | success = success && ReadRowData(file, matrix, i); |
| 65 | } | ||
| 66 | |||
| 67 |
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24 | file.close(); |
| 68 | 24 | return success; | |
| 69 | 24 | } | |
| 70 | |||
| 71 |
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144 | void ProcessRowMultiplication(const MatrixCRS &a, const MatrixCRS &b, int row_index, std::vector<double> &row_values) { |
| 72 | std::ranges::fill(row_values, 0.0); | ||
| 73 | |||
| 74 | 144 | int row_start_a = a.row_pointers[static_cast<size_t>(row_index)]; | |
| 75 | 144 | int row_end_a = a.row_pointers[static_cast<size_t>(row_index) + 1]; | |
| 76 | |||
| 77 |
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242 | for (int k = row_start_a; k < row_end_a; ++k) { |
| 78 | 98 | int col_a = a.col_indices[static_cast<size_t>(k)]; | |
| 79 | 98 | double val_a = a.values[static_cast<size_t>(k)]; | |
| 80 | |||
| 81 | 98 | int row_start_b = b.row_pointers[static_cast<size_t>(col_a)]; | |
| 82 | 98 | int row_end_b = b.row_pointers[static_cast<size_t>(col_a) + 1]; | |
| 83 | |||
| 84 |
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242 | for (int idx = row_start_b; idx < row_end_b; ++idx) { |
| 85 | 144 | int col_b = b.col_indices[static_cast<size_t>(idx)]; | |
| 86 | 144 | double val_b = b.values[static_cast<size_t>(idx)]; | |
| 87 | 144 | row_values[static_cast<size_t>(col_b)] += val_a * val_b; | |
| 88 | } | ||
| 89 | } | ||
| 90 | 144 | } | |
| 91 | |||
| 92 | 144 | void CollectRowResult(const std::vector<double> &row_values, MatrixCRS &result, int row_index) { | |
| 93 |
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922 | for (size_t j = 0; j < row_values.size(); ++j) { |
| 94 |
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778 | if (row_values[j] != 0.0) { |
| 95 |
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124 | result.values.push_back(row_values[j]); |
| 96 | 124 | result.col_indices.push_back(static_cast<int>(j)); | |
| 97 | } | ||
| 98 | } | ||
| 99 | |||
| 100 | 144 | result.row_pointers[static_cast<size_t>(row_index) + 1] = static_cast<int>(result.values.size()); | |
| 101 | 144 | } | |
| 102 | |||
| 103 | 24 | MatrixCRS MultiplyMatricesImpl(const MatrixCRS &a, const MatrixCRS &b) { | |
| 104 | 24 | MatrixCRS result; | |
| 105 | 24 | result.rows = a.rows; | |
| 106 | 24 | result.cols = b.cols; | |
| 107 |
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24 | result.row_pointers.resize(static_cast<size_t>(result.rows) + 1); |
| 108 | |||
| 109 |
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24 | if (result.row_pointers.empty()) { |
| 110 | return result; | ||
| 111 | } | ||
| 112 | |||
| 113 | 24 | result.row_pointers[0] = 0; | |
| 114 | |||
| 115 |
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24 | std::vector<double> row_values(static_cast<size_t>(result.cols), 0.0); |
| 116 | |||
| 117 |
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168 | for (int i = 0; i < a.rows; ++i) { |
| 118 | 144 | ProcessRowMultiplication(a, b, i, row_values); | |
| 119 |
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144 | CollectRowResult(row_values, result, i); |
| 120 | } | ||
| 121 | |||
| 122 | return result; | ||
| 123 | ✗ | } | |
| 124 | |||
| 125 | double SumMatrixElementsImpl(const MatrixCRS &matrix) { | ||
| 126 | double sum = 0.0; | ||
| 127 | |||
| 128 |
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136 | for (double value : matrix.values) { |
| 129 | 124 | sum += value; | |
| 130 | } | ||
| 131 | |||
| 132 | return sum; | ||
| 133 | } | ||
| 134 | |||
| 135 | 108 | std::vector<int> GetLocalRowsImpl(int rank, int size, int total_rows) { | |
| 136 | 108 | std::vector<int> local_rows; | |
| 137 | 108 | int rows_per_process = total_rows / size; | |
| 138 | 108 | int remainder = total_rows % size; | |
| 139 | |||
| 140 |
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108 | int start_row = (rank * rows_per_process) + std::min(rank, remainder); |
| 141 |
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108 | int end_row = start_row + rows_per_process + (rank < remainder ? 1 : 0); |
| 142 | |||
| 143 |
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744 | for (int i = start_row; i < end_row; ++i) { |
| 144 | local_rows.push_back(i); | ||
| 145 | } | ||
| 146 | |||
| 147 | 108 | return local_rows; | |
| 148 | } | ||
| 149 | |||
| 150 | 10 | void PrepareRowDataForSending(const std::vector<int> &proc_rows, const MatrixCRS &matrix_a, std::vector<int> &row_nnz, | |
| 151 | std::vector<int> &col_indices, std::vector<double> &values) { | ||
| 152 |
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78 | for (int row_idx : proc_rows) { |
| 153 |
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68 | int row_start = matrix_a.row_pointers[static_cast<size_t>(row_idx)]; |
| 154 | 68 | int row_end = matrix_a.row_pointers[static_cast<size_t>(row_idx) + 1]; | |
| 155 |
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68 | int row_nnz_count = row_end - row_start; |
| 156 | row_nnz.push_back(row_nnz_count); | ||
| 157 | |||
| 158 |
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113 | for (int i = row_start; i < row_end; ++i) { |
| 159 |
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45 | col_indices.push_back(matrix_a.col_indices[static_cast<size_t>(i)]); |
| 160 | } | ||
| 161 | |||
| 162 |
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113 | for (int i = row_start; i < row_end; ++i) { |
| 163 |
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45 | values.push_back(matrix_a.values[static_cast<size_t>(i)]); |
| 164 | } | ||
| 165 | } | ||
| 166 | 10 | } | |
| 167 | |||
| 168 | 10 | void SendRowDataToProcess(int proc, const std::vector<int> &row_nnz, const std::vector<int> &col_indices, | |
| 169 | const std::vector<double> &values) { | ||
| 170 | 10 | int row_nnz_size = static_cast<int>(row_nnz.size()); | |
| 171 | 10 | MPI_Send(row_nnz.data(), row_nnz_size, MPI_INT, proc, 1, MPI_COMM_WORLD); | |
| 172 | |||
| 173 | 10 | int col_indices_size = static_cast<int>(col_indices.size()); | |
| 174 | 10 | MPI_Send(&col_indices_size, 1, MPI_INT, proc, 2, MPI_COMM_WORLD); | |
| 175 | |||
| 176 |
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10 | if (col_indices_size > 0) { |
| 177 | 6 | MPI_Send(col_indices.data(), col_indices_size, MPI_INT, proc, 3, MPI_COMM_WORLD); | |
| 178 | } | ||
| 179 | |||
| 180 | 10 | int values_size = static_cast<int>(values.size()); | |
| 181 | 10 | MPI_Send(&values_size, 1, MPI_INT, proc, 4, MPI_COMM_WORLD); | |
| 182 | |||
| 183 |
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10 | if (values_size > 0) { |
| 184 | 6 | MPI_Send(values.data(), values_size, MPI_DOUBLE, proc, 5, MPI_COMM_WORLD); | |
| 185 | } | ||
| 186 | 10 | } | |
| 187 | |||
| 188 | 12 | void SendMatrixDataToProcess(int proc, const std::vector<int> &proc_rows, const MatrixCRS &matrix_a) { | |
| 189 | 12 | int num_rows = static_cast<int>(proc_rows.size()); | |
| 190 | 12 | MPI_Send(&num_rows, 1, MPI_INT, proc, 0, MPI_COMM_WORLD); | |
| 191 | |||
| 192 |
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12 | if (num_rows > 0) { |
| 193 | 10 | std::vector<int> row_nnz; | |
| 194 | 10 | std::vector<int> col_indices; | |
| 195 | 10 | std::vector<double> values; | |
| 196 | |||
| 197 |
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10 | PrepareRowDataForSending(proc_rows, matrix_a, row_nnz, col_indices, values); |
| 198 |
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10 | SendRowDataToProcess(proc, row_nnz, col_indices, values); |
| 199 | } | ||
| 200 | 12 | } | |
| 201 | |||
| 202 | 10 | void ReceiveRowDataFromMaster(int num_rows, std::vector<int> &row_nnz, std::vector<int> &col_indices, | |
| 203 | std::vector<double> &values) { | ||
| 204 | 10 | row_nnz.resize(static_cast<size_t>(num_rows)); | |
| 205 | 10 | MPI_Recv(row_nnz.data(), num_rows, MPI_INT, 0, 1, MPI_COMM_WORLD, MPI_STATUS_IGNORE); | |
| 206 | |||
| 207 | 10 | int col_indices_size = 0; | |
| 208 | 10 | MPI_Recv(&col_indices_size, 1, MPI_INT, 0, 2, MPI_COMM_WORLD, MPI_STATUS_IGNORE); | |
| 209 | |||
| 210 |
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10 | if (col_indices_size > 0) { |
| 211 | 6 | col_indices.resize(static_cast<size_t>(col_indices_size)); | |
| 212 | 6 | MPI_Recv(col_indices.data(), col_indices_size, MPI_INT, 0, 3, MPI_COMM_WORLD, MPI_STATUS_IGNORE); | |
| 213 | } | ||
| 214 | |||
| 215 | 10 | int values_size = 0; | |
| 216 | 10 | MPI_Recv(&values_size, 1, MPI_INT, 0, 4, MPI_COMM_WORLD, MPI_STATUS_IGNORE); | |
| 217 | |||
| 218 |
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10 | if (values_size > 0) { |
| 219 | 6 | values.resize(static_cast<size_t>(values_size)); | |
| 220 | 6 | MPI_Recv(values.data(), values_size, MPI_DOUBLE, 0, 5, MPI_COMM_WORLD, MPI_STATUS_IGNORE); | |
| 221 | } | ||
| 222 | 10 | } | |
| 223 | |||
| 224 | 10 | void BuildLocalMatrixFromReceivedData(const std::vector<int> &row_nnz, const std::vector<int> &col_indices, | |
| 225 | const std::vector<double> &values, MatrixCRS &local_a_rows) { | ||
| 226 | 10 | local_a_rows.row_pointers.resize(static_cast<size_t>(local_a_rows.rows) + 1); | |
| 227 | 10 | local_a_rows.row_pointers[0] = 0; | |
| 228 | |||
| 229 | size_t col_idx_pos = 0; | ||
| 230 | size_t val_pos = 0; | ||
| 231 | |||
| 232 |
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78 | for (int i = 0; i < local_a_rows.rows; ++i) { |
| 233 | 68 | int nnz = row_nnz[static_cast<size_t>(i)]; | |
| 234 | |||
| 235 |
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113 | for (int j = 0; j < nnz; ++j) { |
| 236 |
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45 | local_a_rows.col_indices.push_back(col_indices[col_idx_pos]); |
| 237 | 45 | col_idx_pos++; | |
| 238 |
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45 | local_a_rows.values.push_back(values[val_pos]); |
| 239 | val_pos++; | ||
| 240 | } | ||
| 241 | |||
| 242 | 68 | local_a_rows.row_pointers[i + 1] = local_a_rows.row_pointers[i] + nnz; | |
| 243 | } | ||
| 244 | 10 | } | |
| 245 | |||
| 246 | 12 | void ReceiveMatrixDataFromMaster(int rank, int size, MatrixCRS &local_a_rows, std::vector<int> &local_rows, | |
| 247 | int rows_a) { | ||
| 248 | 12 | int num_rows = 0; | |
| 249 | 12 | MPI_Recv(&num_rows, 1, MPI_INT, 0, 0, MPI_COMM_WORLD, MPI_STATUS_IGNORE); | |
| 250 | 12 | local_rows = GetLocalRowsImpl(rank, size, rows_a); | |
| 251 | |||
| 252 |
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12 | if (num_rows > 0) { |
| 253 | 10 | std::vector<int> row_nnz; | |
| 254 | 10 | std::vector<int> col_indices; | |
| 255 | 10 | std::vector<double> values; | |
| 256 | |||
| 257 | 10 | local_a_rows.rows = num_rows; | |
| 258 | |||
| 259 |
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10 | ReceiveRowDataFromMaster(num_rows, row_nnz, col_indices, values); |
| 260 |
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10 | BuildLocalMatrixFromReceivedData(row_nnz, col_indices, values, local_a_rows); |
| 261 | } | ||
| 262 | 12 | } | |
| 263 | |||
| 264 | 76 | void ProcessLocalRowForInitialization(int global_row, const MatrixCRS &matrix_a, MatrixCRS &local_a_rows, | |
| 265 | size_t local_index) { | ||
| 266 | 76 | int row_start = matrix_a.row_pointers[static_cast<size_t>(global_row)]; | |
| 267 | 76 | int row_end = matrix_a.row_pointers[static_cast<size_t>(global_row) + 1]; | |
| 268 | 76 | int row_nnz_count = row_end - row_start; | |
| 269 | |||
| 270 |
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129 | for (int j = row_start; j < row_end; ++j) { |
| 271 |
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53 | local_a_rows.col_indices.push_back(matrix_a.col_indices[static_cast<size_t>(j)]); |
| 272 |
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53 | local_a_rows.values.push_back(matrix_a.values[static_cast<size_t>(j)]); |
| 273 | } | ||
| 274 | |||
| 275 | 76 | local_a_rows.row_pointers[local_index + 1] = local_a_rows.row_pointers[local_index] + row_nnz_count; | |
| 276 | 76 | } | |
| 277 | |||
| 278 | 12 | void InitializeLocalRowsOnMaster(int rank, int size, MatrixCRS &matrix_a, MatrixCRS &local_a_rows, | |
| 279 | std::vector<int> &local_rows) { | ||
| 280 | 24 | local_rows = GetLocalRowsImpl(rank, size, matrix_a.rows); | |
| 281 | 12 | local_a_rows.rows = static_cast<int>(local_rows.size()); | |
| 282 | 12 | local_a_rows.cols = matrix_a.cols; | |
| 283 | 12 | local_a_rows.row_pointers.resize(static_cast<size_t>(local_a_rows.rows) + 1); | |
| 284 | 12 | local_a_rows.row_pointers[0] = 0; | |
| 285 | |||
| 286 |
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88 | for (size_t i = 0; i < local_rows.size(); ++i) { |
| 287 | 76 | int global_row = local_rows[i]; | |
| 288 | 76 | ProcessLocalRowForInitialization(global_row, matrix_a, local_a_rows, i); | |
| 289 | } | ||
| 290 | 12 | } | |
| 291 | |||
| 292 | 12 | void GatherLocalRowCountsMaster(const MatrixCRS &local_result, const std::vector<int> &local_rows, | |
| 293 | std::vector<int> &all_nnz_counts) { | ||
| 294 | 12 | std::vector<int> local_nnz_counts; | |
| 295 | |||
| 296 |
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88 | for (size_t i = 0; i < local_rows.size(); ++i) { |
| 297 |
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76 | int row_nnz = local_result.row_pointers[i + 1] - local_result.row_pointers[i]; |
| 298 | local_nnz_counts.push_back(row_nnz); | ||
| 299 | } | ||
| 300 | |||
| 301 |
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88 | for (size_t i = 0; i < local_rows.size(); ++i) { |
| 302 | 76 | int global_row = local_rows[i]; | |
| 303 | 76 | all_nnz_counts[static_cast<size_t>(global_row)] = local_nnz_counts[i]; | |
| 304 | } | ||
| 305 | 12 | } | |
| 306 | |||
| 307 | 12 | void GatherLocalRowCountsWorker(const MatrixCRS &local_result, const std::vector<int> &local_rows) { | |
| 308 | 12 | std::vector<int> local_nnz_counts; | |
| 309 | |||
| 310 |
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80 | for (size_t i = 0; i < local_rows.size(); ++i) { |
| 311 |
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68 | int row_nnz = local_result.row_pointers[i + 1] - local_result.row_pointers[i]; |
| 312 | local_nnz_counts.push_back(row_nnz); | ||
| 313 | } | ||
| 314 | |||
| 315 |
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12 | if (!local_nnz_counts.empty()) { |
| 316 |
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10 | MPI_Send(local_nnz_counts.data(), static_cast<int>(local_nnz_counts.size()), MPI_INT, 0, 0, MPI_COMM_WORLD); |
| 317 | } else { | ||
| 318 | 2 | int dummy = 0; | |
| 319 |
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2 | MPI_Send(&dummy, 0, MPI_INT, 0, 0, MPI_COMM_WORLD); |
| 320 | } | ||
| 321 | 12 | } | |
| 322 | |||
| 323 | 12 | void ReceiveRowCountsFromProcesses(int size, int rows_a, std::vector<int> &all_nnz_counts) { | |
| 324 |
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24 | for (int proc = 1; proc < size; ++proc) { |
| 325 | 12 | std::vector<int> proc_rows = GetLocalRowsImpl(proc, size, rows_a); | |
| 326 | 12 | int proc_num_rows = static_cast<int>(proc_rows.size()); | |
| 327 | |||
| 328 |
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12 | if (proc_num_rows > 0) { |
| 329 |
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10 | std::vector<int> proc_nnz_counts(static_cast<size_t>(proc_num_rows)); |
| 330 |
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10 | MPI_Recv(proc_nnz_counts.data(), proc_num_rows, MPI_INT, proc, 0, MPI_COMM_WORLD, MPI_STATUS_IGNORE); |
| 331 | |||
| 332 |
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78 | for (int i = 0; i < proc_num_rows; ++i) { |
| 333 | 68 | int global_row = proc_rows[static_cast<size_t>(i)]; | |
| 334 | 68 | all_nnz_counts[static_cast<size_t>(global_row)] = proc_nnz_counts[static_cast<size_t>(i)]; | |
| 335 | } | ||
| 336 | } else { | ||
| 337 | 2 | int dummy = 0; | |
| 338 |
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2 | MPI_Recv(&dummy, 0, MPI_INT, proc, 0, MPI_COMM_WORLD, MPI_STATUS_IGNORE); |
| 339 | } | ||
| 340 | } | ||
| 341 | 12 | } | |
| 342 | |||
| 343 | 24 | void GatherRowCounts(int rank, int size, const MatrixCRS &local_result, MatrixCRS &result_matrix) { | |
| 344 | 24 | std::vector<int> local_rows = GetLocalRowsImpl(rank, size, result_matrix.rows); | |
| 345 | |||
| 346 |
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24 | if (rank == 0) { |
| 347 |
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12 | std::vector<int> all_nnz_counts(static_cast<size_t>(result_matrix.rows), 0); |
| 348 | |||
| 349 |
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12 | GatherLocalRowCountsMaster(local_result, local_rows, all_nnz_counts); |
| 350 |
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12 | ReceiveRowCountsFromProcesses(size, result_matrix.rows, all_nnz_counts); |
| 351 | |||
| 352 | 12 | result_matrix.row_pointers[0] = 0; | |
| 353 |
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156 | for (int i = 0; i < result_matrix.rows; ++i) { |
| 354 | 144 | result_matrix.row_pointers[i + 1] = result_matrix.row_pointers[i] + all_nnz_counts[static_cast<size_t>(i)]; | |
| 355 | } | ||
| 356 | |||
| 357 |
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24 | for (int proc = 1; proc < size; ++proc) { |
| 358 |
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12 | MPI_Send(result_matrix.row_pointers.data(), result_matrix.rows + 1, MPI_INT, proc, 1, MPI_COMM_WORLD); |
| 359 | } | ||
| 360 | } else { | ||
| 361 |
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12 | GatherLocalRowCountsWorker(local_result, local_rows); |
| 362 | |||
| 363 |
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12 | MPI_Recv(result_matrix.row_pointers.data(), result_matrix.rows + 1, MPI_INT, 0, 1, MPI_COMM_WORLD, |
| 364 | MPI_STATUS_IGNORE); | ||
| 365 | } | ||
| 366 | 24 | } | |
| 367 | |||
| 368 | 12 | void SendLocalRowDataToMaster(const MatrixCRS &local_result, const std::vector<int> &local_rows) { | |
| 369 |
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80 | for (size_t i = 0; i < local_rows.size(); ++i) { |
| 370 | 68 | int global_row = local_rows[i]; | |
| 371 | 68 | int local_start = local_result.row_pointers[i]; | |
| 372 | 68 | int local_end = local_result.row_pointers[i + 1]; | |
| 373 | 68 | int row_nnz = local_end - local_start; | |
| 374 | |||
| 375 |
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68 | if (row_nnz > 0) { |
| 376 | 38 | MPI_Send(&local_result.col_indices[static_cast<size_t>(local_start)], row_nnz, MPI_INT, 0, global_row * 2, | |
| 377 | MPI_COMM_WORLD); | ||
| 378 | 38 | MPI_Send(&local_result.values[static_cast<size_t>(local_start)], row_nnz, MPI_DOUBLE, 0, (global_row * 2) + 1, | |
| 379 | MPI_COMM_WORLD); | ||
| 380 | } | ||
| 381 | } | ||
| 382 | 12 | } | |
| 383 | |||
| 384 | 12 | void ReceiveRowDataFromProcess(int proc, int size, MatrixCRS &result_matrix) { | |
| 385 | 12 | std::vector<int> proc_rows = GetLocalRowsImpl(proc, size, result_matrix.rows); | |
| 386 | |||
| 387 |
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80 | for (int global_row : proc_rows) { |
| 388 |
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68 | int row_start = result_matrix.row_pointers[static_cast<size_t>(global_row)]; |
| 389 | 68 | int row_end = result_matrix.row_pointers[static_cast<size_t>(global_row) + 1]; | |
| 390 | 68 | int row_nnz = row_end - row_start; | |
| 391 | |||
| 392 |
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68 | if (row_nnz > 0) { |
| 393 |
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38 | MPI_Recv(&result_matrix.col_indices[static_cast<size_t>(row_start)], row_nnz, MPI_INT, proc, global_row * 2, |
| 394 | MPI_COMM_WORLD, MPI_STATUS_IGNORE); | ||
| 395 |
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38 | MPI_Recv(&result_matrix.values[static_cast<size_t>(row_start)], row_nnz, MPI_DOUBLE, proc, (global_row * 2) + 1, |
| 396 | MPI_COMM_WORLD, MPI_STATUS_IGNORE); | ||
| 397 | } | ||
| 398 | } | ||
| 399 | 12 | } | |
| 400 | |||
| 401 | 12 | void GatherLocalRowDataOnMaster(const MatrixCRS &local_result, const std::vector<int> &local_rows, | |
| 402 | MatrixCRS &result_matrix) { | ||
| 403 |
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88 | for (size_t i = 0; i < local_rows.size(); ++i) { |
| 404 | 76 | int global_row = local_rows[i]; | |
| 405 | 76 | int local_start = local_result.row_pointers[i]; | |
| 406 | 76 | int local_end = local_result.row_pointers[i + 1]; | |
| 407 | 76 | int row_nnz = local_end - local_start; | |
| 408 | |||
| 409 |
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76 | if (row_nnz > 0) { |
| 410 | 31 | int row_start = result_matrix.row_pointers[static_cast<size_t>(global_row)]; | |
| 411 | |||
| 412 | 31 | std::copy(local_result.col_indices.begin() + static_cast<std::vector<int>::difference_type>(local_start), | |
| 413 | local_result.col_indices.begin() + static_cast<std::vector<int>::difference_type>(local_end), | ||
| 414 | result_matrix.col_indices.begin() + static_cast<std::vector<int>::difference_type>(row_start)); | ||
| 415 | |||
| 416 | 31 | std::copy(local_result.values.begin() + static_cast<std::vector<double>::difference_type>(local_start), | |
| 417 | local_result.values.begin() + static_cast<std::vector<double>::difference_type>(local_end), | ||
| 418 | result_matrix.values.begin() + static_cast<std::vector<double>::difference_type>(row_start)); | ||
| 419 | } | ||
| 420 | } | ||
| 421 | 12 | } | |
| 422 | |||
| 423 | 24 | void GatherRowData(int rank, int size, const MatrixCRS &local_result, MatrixCRS &result_matrix) { | |
| 424 | 24 | std::vector<int> local_rows = GetLocalRowsImpl(rank, size, result_matrix.rows); | |
| 425 | |||
| 426 |
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24 | if (rank == 0) { |
| 427 | 12 | GatherLocalRowDataOnMaster(local_result, local_rows, result_matrix); | |
| 428 | |||
| 429 |
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24 | for (int proc = 1; proc < size; ++proc) { |
| 430 |
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12 | ReceiveRowDataFromProcess(proc, size, result_matrix); |
| 431 | } | ||
| 432 | } else { | ||
| 433 |
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12 | SendLocalRowDataToMaster(local_result, local_rows); |
| 434 | } | ||
| 435 | 24 | } | |
| 436 | |||
| 437 | } // namespace | ||
| 438 | |||
| 439 | 24 | YakimovIMultiplicationOfSparseMatricesMPI::YakimovIMultiplicationOfSparseMatricesMPI(const InType &in) { | |
| 440 | SetTypeOfTask(GetStaticTypeOfTask()); | ||
| 441 | 24 | GetInput() = in; | |
| 442 | GetOutput() = 0.0; | ||
| 443 | |||
| 444 |
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48 | matrix_A_filename_ = ppc::util::GetAbsoluteTaskPath("yakimov_i_multiplication_of_sparse_matrices_crs_storage_format", |
| 445 | 48 | "A_" + std::to_string(GetInput()) + ".txt"); | |
| 446 |
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48 | matrix_B_filename_ = ppc::util::GetAbsoluteTaskPath("yakimov_i_multiplication_of_sparse_matrices_crs_storage_format", |
| 447 |
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48 | "B_" + std::to_string(GetInput()) + ".txt"); |
| 448 | 24 | } | |
| 449 | |||
| 450 | 24 | bool YakimovIMultiplicationOfSparseMatricesMPI::ValidationImpl() { | |
| 451 | 24 | int rank = 0; | |
| 452 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 453 | |||
| 454 |
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24 | if (rank == 0) { |
| 455 | 12 | bool input_valid = (GetInput() > 0); | |
| 456 | 12 | bool output_valid = (GetOutput() == 0.0); | |
| 457 | 12 | return input_valid && output_valid; | |
| 458 | } | ||
| 459 | |||
| 460 | return true; | ||
| 461 | } | ||
| 462 | |||
| 463 | 24 | bool YakimovIMultiplicationOfSparseMatricesMPI::PreProcessingImpl() { | |
| 464 | 24 | int rank = 0; | |
| 465 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 466 | |||
| 467 | bool success = true; | ||
| 468 | |||
| 469 |
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24 | if (rank == 0) { |
| 470 |
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12 | success = success && ReadMatrixFromFileImpl(matrix_A_filename_, matrix_A_); |
| 471 |
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12 | success = success && ReadMatrixFromFileImpl(matrix_B_filename_, matrix_B_); |
| 472 | |||
| 473 | if (!success) { | ||
| 474 | ✗ | return false; | |
| 475 | } | ||
| 476 | |||
| 477 |
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12 | if (matrix_A_.cols != matrix_B_.rows) { |
| 478 | return false; | ||
| 479 | } | ||
| 480 | } | ||
| 481 | |||
| 482 | 24 | BroadcastMatrixInfo(); | |
| 483 | 24 | MPI_Barrier(MPI_COMM_WORLD); | |
| 484 | |||
| 485 | return success; | ||
| 486 | } | ||
| 487 | |||
| 488 | 24 | void YakimovIMultiplicationOfSparseMatricesMPI::BroadcastMatrixInfo() { | |
| 489 | 24 | int rank = 0; | |
| 490 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 491 | |||
| 492 | 24 | std::array<int, 4> matrix_info = {0, 0, 0, 0}; | |
| 493 | |||
| 494 |
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24 | if (rank == 0) { |
| 495 | 12 | matrix_info[0] = matrix_A_.rows; | |
| 496 | 12 | matrix_info[1] = matrix_A_.cols; | |
| 497 | 12 | matrix_info[2] = matrix_B_.rows; | |
| 498 | 12 | matrix_info[3] = matrix_B_.cols; | |
| 499 | } | ||
| 500 | |||
| 501 | 24 | MPI_Bcast(matrix_info.data(), 4, MPI_INT, 0, MPI_COMM_WORLD); | |
| 502 | |||
| 503 | 24 | rows_A_ = matrix_info[0]; | |
| 504 | 24 | cols_A_ = matrix_info[1]; | |
| 505 | 24 | rows_B_ = matrix_info[2]; | |
| 506 | 24 | cols_B_ = matrix_info[3]; | |
| 507 | 24 | } | |
| 508 | |||
| 509 | 24 | void YakimovIMultiplicationOfSparseMatricesMPI::DistributeMatrixA() { | |
| 510 | 24 | int rank = 0; | |
| 511 | 24 | int size = 0; | |
| 512 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 513 | 24 | MPI_Comm_size(MPI_COMM_WORLD, &size); | |
| 514 | |||
| 515 |
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24 | if (rank == 0) { |
| 516 |
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24 | for (int proc = 1; proc < size; ++proc) { |
| 517 | 12 | std::vector<int> proc_rows = GetLocalRowsImpl(proc, size, matrix_A_.rows); | |
| 518 |
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12 | SendMatrixDataToProcess(proc, proc_rows, matrix_A_); |
| 519 | } | ||
| 520 | |||
| 521 | 12 | InitializeLocalRowsOnMaster(rank, size, matrix_A_, local_a_rows_, local_rows_); | |
| 522 | } else { | ||
| 523 | 12 | ReceiveMatrixDataFromMaster(rank, size, local_a_rows_, local_rows_, rows_A_); | |
| 524 | } | ||
| 525 | 24 | } | |
| 526 | |||
| 527 | 24 | void YakimovIMultiplicationOfSparseMatricesMPI::DistributeMatrixB() { | |
| 528 | 24 | int rank = 0; | |
| 529 | 24 | int size = 0; | |
| 530 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 531 | 24 | MPI_Comm_size(MPI_COMM_WORLD, &size); | |
| 532 | |||
| 533 |
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24 | if (rank == 0) { |
| 534 | 12 | int total_nnz = static_cast<int>(matrix_B_.values.size()); | |
| 535 | 12 | MPI_Bcast(&total_nnz, 1, MPI_INT, 0, MPI_COMM_WORLD); | |
| 536 | |||
| 537 |
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12 | if (total_nnz > 0) { |
| 538 | 12 | MPI_Bcast(matrix_B_.row_pointers.data(), matrix_B_.rows + 1, MPI_INT, 0, MPI_COMM_WORLD); | |
| 539 | 12 | MPI_Bcast(matrix_B_.col_indices.data(), total_nnz, MPI_INT, 0, MPI_COMM_WORLD); | |
| 540 | 12 | MPI_Bcast(matrix_B_.values.data(), total_nnz, MPI_DOUBLE, 0, MPI_COMM_WORLD); | |
| 541 | } | ||
| 542 | |||
| 543 | 12 | matrix_B_.rows = rows_B_; | |
| 544 | 12 | matrix_B_.cols = cols_B_; | |
| 545 | } else { | ||
| 546 | 12 | int total_nnz = 0; | |
| 547 | 12 | MPI_Bcast(&total_nnz, 1, MPI_INT, 0, MPI_COMM_WORLD); | |
| 548 | |||
| 549 |
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12 | if (total_nnz > 0) { |
| 550 | 12 | matrix_B_.rows = rows_B_; | |
| 551 | 12 | matrix_B_.cols = cols_B_; | |
| 552 | 12 | matrix_B_.row_pointers.resize(static_cast<size_t>(matrix_B_.rows) + 1); | |
| 553 | 12 | matrix_B_.col_indices.resize(static_cast<size_t>(total_nnz)); | |
| 554 | 12 | matrix_B_.values.resize(static_cast<size_t>(total_nnz)); | |
| 555 | |||
| 556 | 12 | MPI_Bcast(matrix_B_.row_pointers.data(), matrix_B_.rows + 1, MPI_INT, 0, MPI_COMM_WORLD); | |
| 557 | 12 | MPI_Bcast(matrix_B_.col_indices.data(), total_nnz, MPI_INT, 0, MPI_COMM_WORLD); | |
| 558 | 12 | MPI_Bcast(matrix_B_.values.data(), total_nnz, MPI_DOUBLE, 0, MPI_COMM_WORLD); | |
| 559 | } | ||
| 560 | } | ||
| 561 | 24 | } | |
| 562 | |||
| 563 | 24 | void YakimovIMultiplicationOfSparseMatricesMPI::GatherResults() { | |
| 564 | 24 | int rank = 0; | |
| 565 | 24 | int size = 0; | |
| 566 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 567 | 24 | MPI_Comm_size(MPI_COMM_WORLD, &size); | |
| 568 | |||
| 569 |
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24 | if (rank == 0) { |
| 570 | 12 | result_matrix_.rows = rows_A_; | |
| 571 | 12 | result_matrix_.cols = cols_B_; | |
| 572 | } | ||
| 573 | |||
| 574 | 24 | std::array<int, 2> dims = {rows_A_, cols_B_}; | |
| 575 | 24 | MPI_Bcast(dims.data(), 2, MPI_INT, 0, MPI_COMM_WORLD); | |
| 576 | |||
| 577 |
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24 | if (rank != 0) { |
| 578 | 12 | result_matrix_.rows = dims[0]; | |
| 579 | 12 | result_matrix_.cols = dims[1]; | |
| 580 | } | ||
| 581 | |||
| 582 | 24 | result_matrix_.row_pointers.resize(static_cast<size_t>(result_matrix_.rows) + 1); | |
| 583 | 24 | GatherRowCounts(rank, size, local_result_, result_matrix_); | |
| 584 | |||
| 585 |
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24 | if (rank == 0) { |
| 586 | 12 | int total_nnz = result_matrix_.row_pointers[static_cast<size_t>(rows_A_)]; | |
| 587 | 12 | result_matrix_.col_indices.resize(static_cast<size_t>(total_nnz)); | |
| 588 | 12 | result_matrix_.values.resize(static_cast<size_t>(total_nnz)); | |
| 589 | } | ||
| 590 | |||
| 591 | 24 | GatherRowData(rank, size, local_result_, result_matrix_); | |
| 592 | 24 | } | |
| 593 | |||
| 594 | 24 | bool YakimovIMultiplicationOfSparseMatricesMPI::RunImpl() { | |
| 595 | 24 | int rank = 0; | |
| 596 | 24 | int size = 0; | |
| 597 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 598 | 24 | MPI_Comm_size(MPI_COMM_WORLD, &size); | |
| 599 | |||
| 600 | 24 | DistributeMatrixA(); | |
| 601 | 24 | DistributeMatrixB(); | |
| 602 | 24 | MPI_Barrier(MPI_COMM_WORLD); | |
| 603 | |||
| 604 | 24 | local_result_ = MultiplyMatricesImpl(local_a_rows_, matrix_B_); | |
| 605 | 24 | MPI_Barrier(MPI_COMM_WORLD); | |
| 606 | |||
| 607 | 24 | GatherResults(); | |
| 608 | |||
| 609 | 24 | return true; | |
| 610 | } | ||
| 611 | |||
| 612 | 24 | bool YakimovIMultiplicationOfSparseMatricesMPI::PostProcessingImpl() { | |
| 613 | 24 | int rank = 0; | |
| 614 | 24 | int size = 0; | |
| 615 | 24 | MPI_Comm_rank(MPI_COMM_WORLD, &rank); | |
| 616 | 24 | MPI_Comm_size(MPI_COMM_WORLD, &size); | |
| 617 | |||
| 618 |
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24 | if (rank == 0) { |
| 619 | double sum = SumMatrixElementsImpl(result_matrix_); | ||
| 620 | 12 | GetOutput() = sum; | |
| 621 | } | ||
| 622 | |||
| 623 | 24 | double final_result = 0.0; | |
| 624 |
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24 | if (rank == 0) { |
| 625 | 12 | final_result = GetOutput(); | |
| 626 | } | ||
| 627 | |||
| 628 | 24 | MPI_Bcast(&final_result, 1, MPI_DOUBLE, 0, MPI_COMM_WORLD); | |
| 629 | 24 | GetOutput() = final_result; | |
| 630 | |||
| 631 | 24 | return true; | |
| 632 | } | ||
| 633 | |||
| 634 | } // namespace yakimov_i_multiplication_of_sparse_matrices_crs_storage_format | ||
| 635 |